DSDPy documentation

DSDPy is a processor for DNA strand displacement systems. DSDPy generates the whole reaction network given the initial species and supports the simulation of such reaction network.

Contents:

• Tutorial
  • Prerequisities
    • Required Packages
      • Use
      • Programmatic Use
  • Creating Your Own Input
    • Example input1
    • Example input2
  • Obtaining the Output
    • Text File on the Reaction Network
    • PNG File Visualizing the BNG Simulation Results
  • Modify the Documentation
• DSDPy
  • Entry Point
  • Packages
    • basics
    • reaction
    • species
    • strand
    • util

Indices and tables

• Index

• Module Index

• Search Page